Bridging experimental and computational biology

Molecular and computational biologist with expertise in next generation sequencing, genomics, data analysis, and bioinformatic tool development. Passionate about uncovering novel biological insights through integrated approaches.

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Emily Weiss
Ice climbing
In the lab
Cheese bacteria
Climbing in Red Rocks
House rabbits rule
Ice climbing
In the lab
Cheese bacteria
Climbing in Red Rocks
House rabbits rule

About Me

Dedicated to excellence in every project I undertake

I'm a molecular and computational biologist with over 15 years of combined academic and industry experience. I thrive at the intersection of wet-lab experimentation and computational discovery, turning biological complexity into meaningful scientific breakthroughs.

As a scientist on a company creation team at Arcadia Science, I lead rapid exploratory pilots that uncover evolutionary innovations with therapeutic and biotechnological potential. I architect scalable, reproducible Python-based pipelines and deploy machine learning tools to transform complex biological data into actionable hypotheses.

My research spans high-throughput genomics/transcriptomics, meta-analysis of large public datasets, plant metabolic engineering, and microbiology and microbiome science — with publications in top-tier journals including Nature Microbiology.

In my free time, I enjoy foraging, rock climbing, and doting on my two house rabbits.

Skills & Expertise

Core competencies that drive my professional practice

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Genomics & NGS

Short- and long-read sequencing, library preparation, genomics/transcriptomics analysis

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Bioinformatics

Python/R, data mining & visualization, workflow automation with Snakemake

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Molecular Biology

DNA/RNA extraction, PCR, cloning, transformation, Western & Northern blotting

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Cloud Computing

AWS cloud computing, version control with GitHub, machine learning applications

Research & Publications

Selected work demonstrating expertise in molecular and computational biology

📚 See my full list of publications here
Viral Structural Mimics

Computational Discovery of Viral Structural Mimics

Developed computational methods to identify viral structural mimics with therapeutic potential. Published in Arcadia Science (2025).

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Bacterial-Fungal Interaction

Bacterial-Fungal Interactions

Genome-wide analysis of bacterial mutant fitness revealed key genes in microbial interactions. Featured as cover article in Nature Microbiology.

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Cheese Microbiome Genomics

Cheese Microbiome Genomics

Multi-platform metagenomics study yielding high-quality genomic catalog and in vitro model for cheese communities. Published in mSystems.

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Let's Connect!

I'm always interested in discussing new opportunities and innovative projects in molecular and computational biology. Whether you have a specific question, want to explore collaborative possibilities, or just want to talk about how delightful house rabbits are, I'd love to hear from you.

Location: Oakland, CA, USA